4J0U | pdb_00004j0u

Crystal structure of IFIT5/ISG58

• PDB DOI: https://doi.org/10.2210/pdb4J0U/pdb

• Classification: RNA BINDING PROTEIN
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2013-01-31 Released: 2013-02-13 
• Deposition Author(s): Liu, Y., Liang, H., Feng, F., Yuan, L., Wang, Y.E., Crowley, C., Lv, Z., Li, J., Zeng, S., Cheng, G.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.97 Å
• R-Value Free: 
  0.236 (Depositor), 0.232 (DCC) 
• R-Value Work: 
  0.193 (Depositor), 0.187 (DCC) 
• R-Value Observed: 
  0.196 (Depositor) 

Literature

Crystal Structure of IFIT5

Liu, Y., Liang, H., Feng, F., Yuan, L., Wang, Y.E., Crowley, C., Lv, Z., Li, J., Zeng, S., Cheng, G.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 55.93 kDa 
• Atom Count: 4,220 
• Modeled Residue Count: 471 
• Deposited Residue Count: 482 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Interferon-induced protein with tetratricopeptide repeats 5	A	482	Homo sapiens	Mutation(s): 0  Gene Names: IFIT5
UniProt & NIH Common Fund Data Resources
Find proteins for Q13325 (Homo sapiens) Explore Q13325  Go to UniProtKB:  Q13325
PHAROS:  Q13325 GTEx:  ENSG00000152778

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.97 Å
• R-Value Free:  0.236 (Depositor), 0.232 (DCC) 
• R-Value Work:  0.193 (Depositor), 0.187 (DCC) 
• R-Value Observed: 0.196 (Depositor) 

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 63.722	α = 90
b = 71.529	β = 90
c = 115.527	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data collection
SHARP	phasing
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2013-02-13 
Deposition Author(s): Liu, Y., Liang, H., Feng, F., Yuan, L., Wang, Y.E., Crowley, C., Lv, Z., Li, J., Zeng, S., Cheng, G.

Revision History  

• Version 1.0: 2013-02-13
  Type: Initial release
  
• Version 1.1: 2024-10-16
  Changes: Data collection, Database references, Structure summary