4IKG

Crystal structure of cell death-inducing DFFA-like effector c


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.93 Å
  • R-Value Free: 0.306 
  • R-Value Work: 0.292 
  • R-Value Observed: 0.293 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Perilipin1 promotes unilocular lipid droplet formation through the activation of Fsp27 in adipocytes.

Sun, Z.Gong, J.Wu, H.Xu, W.Wu, L.Xu, D.Gao, J.Wu, J.W.Yang, H.Yang, M.Li, P.

(2013) Nat Commun 4: 1594-1594

  • DOI: https://doi.org/10.1038/ncomms2581
  • Primary Citation of Related Structures:  
    4IKG

  • PubMed Abstract: 

    Mature white adipocytes contain a characteristic unilocular lipid droplet. However, the molecular mechanisms underlying unilocular lipid droplet formation are poorly understood. We previously showed that Fsp27, an adipocyte-specific lipid droplet-associated protein, promotes lipid droplet growth by initiating lipid exchange and transfer. Here, we identify Perilipin1 (Plin1), another adipocyte-specific lipid droplet-associated protein, as an Fsp27 activator. Plin1 interacts with the CIDE-N domain of Fsp27 and markedly increases Fsp27-mediated lipid exchange, lipid transfer and lipid droplet growth. Functional cooperation between Plin1 and Fsp27 is required for efficient lipid droplet growth in adipocytes, as depletion of either protein impairs lipid droplet growth. The CIDE-N domain of Fsp27 forms homodimers and disruption of CIDE-N homodimerization abolishes Fsp27-mediated lipid exchange and transfer. Interestingly, Plin1 can restore the activity of CIDE-N homodimerization-defective mutants of Fsp27. We thus uncover a novel mechanism underlying lipid droplet growth and unilocular lipid droplet formation that involves the cooperative action of Fsp27 and Plin1 in adipocytes.


  • Organizational Affiliation

    Tsinghua-Peking Center for Life Sciences, Tsinghua University, Beijing 100084, China.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Cell death activator CIDE-381Mus musculusMutation(s): 0 
Gene Names: CidecFsp27
UniProt & NIH Common Fund Data Resources
Find proteins for P56198 (Mus musculus)
Explore P56198 
Go to UniProtKB:  P56198
IMPC:  MGI:95585
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP56198
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.93 Å
  • R-Value Free: 0.306 
  • R-Value Work: 0.292 
  • R-Value Observed: 0.293 
  • Space Group: P 65
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 61.615α = 90
b = 61.615β = 90
c = 44.989γ = 120
Software Package:
Software NamePurpose
HKL-2000data collection
DMmodel building
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
DMphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2014-06-04
    Type: Initial release
  • Version 1.1: 2024-02-28
    Changes: Data collection, Database references, Derived calculations