4IDI

Crystal Structure of Rurm1-related protein from Plasmodium Yoelii, PY06420


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.227 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal Structure of Rurm1-related protein from Plasmodium Yoelii, PY06420

Wernimont, A.K.Tempel, W.Lew, J.Walker, J.Arrowsmith, C.H.Edwards, A.M.Schapira, M.Bountra, C.Hui, R.Artz, J.D.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Oryza sativa Rurm1-related
A, B, C, D
144Plasmodium yoelii yoeliiMutation(s): 1 
Find proteins for Q7RAS9 (Plasmodium yoelii yoelii)
Go to UniProtKB:  Q7RAS9
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
B
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.227 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 32.590α = 90.00
b = 72.720β = 92.64
c = 107.510γ = 90.00
Software Package:
Software NamePurpose
DENZOdata reduction
BUSTER-TNTrefinement
HKL-2000data collection
SCALEPACKdata scaling
BALBESphasing
PDB_EXTRACTdata extraction
BUSTERrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-12-25
    Type: Initial release