4I6Z

Crystal structure of the transcriptional regulator TM1030 with 24bp DNA oligonucleotide


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.268 
  • R-Value Work: 0.200 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal structure of the transcriptional regulator TM1030 with 24bp DNA oligonucleotide

Koclega, K.D.Chruszcz, M.Cooper, D.R.Petkowski, J.J.Tkaczuk, K.L.Joachimiak, A.Minor, W.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Transcriptional regulator, TetR family
A, B
202Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)Mutation(s): 0 
Find proteins for Q9X0C0 (Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099))
Go to UniProtKB:  Q9X0C0
Entity ID: 2
MoleculeChainsLengthOrganism
DNA OLIGONUCLEOTIDEC,D24synthetic construct
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 187.008α = 90.00
b = 45.954β = 105.60
c = 82.510γ = 90.00
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
MOLREPphasing
HKL-3000data scaling
HKL-3000data collection
PDB_EXTRACTdata extraction
HKL-3000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-01-02
    Type: Initial release
  • Version 1.1: 2015-05-20
    Type: Derived calculations
  • Version 1.2: 2015-05-27
    Type: Source and taxonomy
  • Version 1.3: 2017-11-15
    Type: Refinement description