4I0H

SPR and structural analysis yield insight towards mechanism of inhibition of BACE inhibitors.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.267 
  • R-Value Work: 0.217 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

SPR and structural analysis yield insight towards mechanism of inhibition of BACE inhibitors

Mondal, K.Regnstrom, K.Morishige, W.Barbour, R.Beroza, P.Yao, N.Bova, M.P.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Beta-secretase 1
A, B, C
406Homo sapiensMutation(s): 0 
Gene Names: BACE1 (BACE, KIAA1149)
EC: 3.4.23.46
Find proteins for P56817 (Homo sapiens)
Go to Gene View: BACE1
Go to UniProtKB:  P56817
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
1BL
Query on 1BL

Download SDF File 
Download CCD File 
A, B, C
(2R)-5-{[(2S,3R)-4-{[1-(3-tert-butylphenyl)cyclohexyl]amino}-1-(3,5-difluorophenyl)-3-hydroxybutan-2-yl]amino}-2-hydroxy-5-oxopentanoic acid
C31 H42 F2 N2 O5
ZQBAKJWCBZPMKW-OYUWMTPXSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.267 
  • R-Value Work: 0.217 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 83.201α = 90.00
b = 105.467β = 105.11
c = 100.265γ = 90.00
Software Package:
Software NamePurpose
CrystalCleardata reduction
CrystalCleardata collection
MOLREPphasing
CrystalCleardata scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2012-11-16 
  • Released Date: 2013-03-06 
  • Deposition Author(s): Yao, N., Brecht, E.

Revision History 

  • Version 1.0: 2013-03-06
    Type: Initial release