4HRH

Crystal Structure of p11-Annexin A2(N-terminal) Fusion Protein in Complex with SMARCA3 Peptide


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.00 Å
  • R-Value Free: 0.263 
  • R-Value Work: 0.220 
  • R-Value Observed: 0.223 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

SMARCA3, a Chromatin-Remodeling Factor, Is Required for p11-Dependent Antidepressant Action.

Oh, Y.S.Gao, P.Lee, K.W.Ceglia, I.Seo, J.S.Zhang, X.Ahn, J.H.Chait, B.T.Patel, D.J.Kim, Y.Greengard, P.

(2013) Cell 152: 831-843

  • DOI: 10.1016/j.cell.2013.01.014
  • Primary Citation of Related Structures:  
    4HRG, 4HRH, 4HRE

  • PubMed Abstract: 
  • p11, through unknown mechanisms, is required for behavioral and cellular responses to selective serotonin reuptake inhibitors (SSRIs). We show that SMARCA3, a chromatin-remodeling factor, is a target for the p11/annexin A2 heterotetrameric complex. Deter ...

    p11, through unknown mechanisms, is required for behavioral and cellular responses to selective serotonin reuptake inhibitors (SSRIs). We show that SMARCA3, a chromatin-remodeling factor, is a target for the p11/annexin A2 heterotetrameric complex. Determination of the crystal structure indicates that SMARCA3 peptide binds to a hydrophobic pocket in the heterotetramer. Formation of this complex increases the DNA-binding affinity of SMARCA3 and its localization to the nuclear matrix fraction. In the dentate gyrus, both p11 and SMARCA3 are highly enriched in hilar mossy cells and basket cells. The SSRI fluoxetine induces expression of p11 in both cell types and increases the amount of the ternary complex of p11/annexin A2/SMARCA3. SSRI-induced neurogenesis and behavioral responses are abolished by constitutive knockout of SMARCA3. Our studies indicate a central role for a chromatin-remodeling factor in the SSRI/p11 signaling pathway and suggest an approach to the development of improved antidepressant therapies. PAPERCLIP:


    Organizational Affiliation

    Laboratory of Molecular and Cellular Neuroscience, The Rockefeller University, New York, NY 10065, USA.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Protein S100-A10, Annexin A2 AB117Homo sapiensMutation(s): 1 
Gene Names: ANX2LGCAL1LCLP11S100A10ANX2ANX2L4ANXA2CAL1HLPC2D
Find proteins for P60903 (Homo sapiens)
Explore P60903 
Go to UniProtKB:  P60903
NIH Common Fund Data Resources
PHAROS:  P60903
Find proteins for P07355 (Homo sapiens)
Explore P07355 
Go to UniProtKB:  P07355
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PHAROS:  P07355
Protein Feature View
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  • Reference Sequence
  • Find similar proteins by:  Sequence   |   Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Helicase-like transcription factor CD14Homo sapiensMutation(s): 0 
Gene Names: HLTFHIP116ARNF80SMARCA3SNF2L3ZBU1
EC: 3.6.4 (PDB Primary Data), 6.3.2 (PDB Primary Data), 2.3.2.27 (UniProt)
Find proteins for Q14527 (Homo sapiens)
Explore Q14527 
Go to UniProtKB:  Q14527
NIH Common Fund Data Resources
PHAROS:  Q14527
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download Ideal Coordinates CCD File 
A, B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.00 Å
  • R-Value Free: 0.263 
  • R-Value Work: 0.220 
  • R-Value Observed: 0.223 
  • Space Group: P 43 3 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 145.106α = 90
b = 145.106β = 90
c = 145.106γ = 90
Software Package:
Software NamePurpose
NECATdata collection
PHASERphasing
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

  • Deposited Date: 2012-10-27 
  • Released Date: 2013-03-06 
  • Deposition Author(s): Gao, P., Patel, D.J.

Revision History 

  • Version 1.0: 2013-03-06
    Type: Initial release
  • Version 1.1: 2017-08-02
    Changes: Refinement description, Source and taxonomy