4HI9

1.2 structure of integrin-linked kinase ankyrin repeat domain in complex with PINCH1 LIM1 domain collected at wavelength 0.91974


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.203 Å
  • R-Value Free: 0.198 
  • R-Value Work: 0.175 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

1.2 structure of integrin-linked kinase ankyrin repeat domain in complex with PINCH1 LIM1 domain collected at wavelength 0.91974

Stiegler, A.L.Jakoncic, J.Stojanoff, V.Chiswell, B.P.Calderwood, D.A.Boggon, T.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Integrin-linked protein kinase
A
179Homo sapiensMutation(s): 0 
Gene Names: ILK (ILK1, ILK2)
EC: 2.7.11.1
Find proteins for Q13418 (Homo sapiens)
Go to Gene View: ILK
Go to UniProtKB:  Q13418
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
LIM and senescent cell antigen-like-containing domain protein 1
B
72Homo sapiensMutation(s): 0 
Gene Names: LIMS1 (PINCH, PINCH1)
Find proteins for P48059 (Homo sapiens)
Go to Gene View: LIMS1
Go to UniProtKB:  P48059
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download SDF File 
Download CCD File 
A
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
ZN
Query on ZN

Download SDF File 
Download CCD File 
B
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
IOD
Query on IOD

Download SDF File 
Download CCD File 
A, B
IODIDE ION
I
XMBWDFGMSWQBCA-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.203 Å
  • R-Value Free: 0.198 
  • R-Value Work: 0.175 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 37.144α = 78.67
b = 41.775β = 68.94
c = 46.798γ = 85.81
Software Package:
Software NamePurpose
SCALEPACKdata scaling
DENZOdata reduction
PDB_EXTRACTdata extraction
PHASERphasing
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
Executordata collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-12-11
    Type: Initial release
  • Version 1.1: 2017-11-15
    Type: Refinement description