4HG2

The Structure of a Putative Type II Methyltransferase from Anaeromyxobacter dehalogenans.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.179 
  • R-Value Work: 0.152 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

The Structure of a Putative Type II Methyltransferase from Anaeromyxobacter dehalogenans.

Cuff, M.E.Chhor, G.Clancy, S.Brown, R.N.Cort, J.R.Heffron, F.Nakayasu, E.S.Adkins, J.N.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Methyltransferase type 11
A, B
257Anaeromyxobacter dehalogenans (strain 2CP-C)Mutation(s): 0 
Find proteins for Q2IE03 (Anaeromyxobacter dehalogenans (strain 2CP-C))
Go to UniProtKB:  Q2IE03
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download SDF File 
Download CCD File 
A, B
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
MES
Query on MES

Download SDF File 
Download CCD File 
A, B
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
C6 H13 N O4 S
SXGZJKUKBWWHRA-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.179 
  • R-Value Work: 0.152 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 48.067α = 90.00
b = 88.447β = 91.99
c = 64.664γ = 90.00
Software Package:
Software NamePurpose
SBC-Collectdata collection
DMphasing
RESOLVEphasing
SHELXEmodel building
PDB_EXTRACTdata extraction
SCALEPACKdata scaling
HKL-3000data scaling
MLPHAREphasing
CCP4phasing
DENZOdata reduction
REFMACrefinement
HKL-3000data reduction
HKL-3000phasing
Omodel building
Cootmodel building
SHELXDphasing
SOLVEphasing
ARP/wARPmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2012-10-17
    Type: Initial release
  • Version 1.1: 2017-11-15
    Type: Data collection, Refinement description