4HCR

Crystal structure of human MAdCAM-1 D1D2 complexed with Fab PF-547659


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.153 
  • R-Value Observed: 0.158 

wwPDB Validation 3D Report Full Report



Literature

A Different Fold with an Integrin-Binding Loop Specialized for Flexibility in Mucosal Addressin Cell Adhesion Molecule-1

Springer, T.Yu, Y.Zhu, J.Wang, J.-H.Huang, P.-S.

To be published.

Macromolecules

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Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PF-547659 heavy chainH, M229Homo sapiensMutation(s): 0 
Protein Feature View
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  • Reference Sequence

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Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
PF-547659 light chainL, N219Homo sapiensMutation(s): 0 
Protein Feature View
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  • Reference Sequence

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Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
Mucosal addressin cell adhesion molecule 1A, B209Homo sapiensMutation(s): 1 
Gene Names: MADCAM1
Find proteins for Q13477 (Homo sapiens)
Explore Q13477 
Go to UniProtKB:  Q13477
NIH Common Fund Data Resources
PHAROS  Q13477
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.153 
  • R-Value Observed: 0.158 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 39.94α = 90
b = 112.26β = 89.95
c = 157.92γ = 90
Software Package:
Software NamePurpose
HKL-2000data collection
PHASERphasing
PHENIXrefinement
HKL-2000data reduction
SCALAdata scaling

Structure Validation

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Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-01-23
    Type: Initial release