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Download EndnoteBacterial Photosynthetic Reaction Center from Rhodobacter sphaeroides
Mattis, A.J., Wraight, C.A.To be published.
4H9L
Bacterial Photosynthetic Reaction Center from Rhodobacter sphaeroides with ILE M265 replaced with SER
- DOI: 10.2210/pdb4H9L/pdb
- Classification: PHOTOSYNTHESIS
- Organism(s): Rhodobacter sphaeroides
- Expression System: Rhodobacter sphaeroides
- Mutation(s): 1
- Deposited: 2012-09-24 Released: 2013-01-23
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.77 Å
- R-Value Free: 0.227
- R-Value Work: 0.191
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Reaction center protein L chain | L | 281 | Rhodobacter sphaeroides | Gene Names: pufL |
Find proteins for P0C0Y8 (Rhodobacter sphaeroides) Go to UniProtKB: P0C0Y8 | ||||
Entity ID: 2 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Reaction center protein M chain | M | 313 | Rhodobacter sphaeroides | Mutations: S265I Gene Names: pufM |
Find proteins for P0C0Y9 (Rhodobacter sphaeroides) Go to UniProtKB: P0C0Y9 | ||||
Entity ID: 3 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Reaction center protein H chain | H | 260 | Rhodobacter sphaeroides | Gene Names: puhA |
Find proteins for P0C0Y7 (Rhodobacter sphaeroides) Go to UniProtKB: P0C0Y7 | ||||
Small Molecules
| Ligands 5 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| U10 Query on U10 | L, M | UBIQUINONE-10 Coenzyme Q10 C59 H90 O4 ACTIUHUUMQJHFO-UPTCCGCDSA-N |  | Ligand Interaction | |
| BCL Query on BCL | L, M | BACTERIOCHLOROPHYLL A C55 H74 Mg N4 O6 DSJXIQQMORJERS-RUUWGSCADZ |  | Ligand Interaction | |
| FE Query on FE | M | FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N |  | Ligand Interaction | |
| BPH Query on BPH | L, M | BACTERIOPHEOPHYTIN A C55 H76 N4 O6 KWOZSBGNAHVCKG-SZQBJALDSA-N |  | Ligand Interaction | |
| SPO Query on SPO | M | SPHEROIDENE C41 H60 O FJOCMTHZSURUFA-KXCOHNEYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.77 Å
- R-Value Free: 0.227
- R-Value Work: 0.191
- Space Group: P 31 2 1
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 140.190 | α = 90.00 |
| b = 140.190 | β = 90.00 |
| c = 184.560 | γ = 120.00 |
| Software Name | Purpose |
|---|---|
| PDB_EXTRACT | data extraction |
| PHENIX | refinement |
| REFMAC | phasing |
| REFMAC | refinement |
| XSCALE | data scaling |
Entry History
Deposition Data
- Deposited Date: 2012-09-24
- Released Date: 2013-01-23
- Deposition Author(s): Mattis, A.J., Wraight, C.A.
Revision History
- Version 1.0: 2013-01-23
Type: Initial release
