4H7N

The Structure of Putative Aldehyde Dehydrogenase PutA from Anabaena variabilis.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.196 
  • R-Value Work: 0.156 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

The Structure of Putative Aldehyde Dehydrogenase PutA from Anabaena variabilis.

Cuff, M.E.Chhor, G.Clancy, S.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Aldehyde dehydrogenase
A, B, C, D
474Anabaena variabilis (strain ATCC 29413 / PCC 7937)Mutation(s): 0 
EC: 1.2.1.3
Find proteins for Q3MAW0 (Anabaena variabilis (strain ATCC 29413 / PCC 7937))
Go to UniProtKB:  Q3MAW0
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
A, B, C, D
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.196 
  • R-Value Work: 0.156 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 105.841α = 90.00
b = 88.513β = 109.97
c = 123.001γ = 90.00
Software Package:
Software NamePurpose
SBC-Collectdata collection
HKL-3000phasing
CCP4phasing
PDB_EXTRACTdata extraction
SHELXDphasing
ARP/wARPmodel building
HKL-3000data scaling
DENZOdata reduction
SCALEPACKdata scaling
SOLVEphasing
HKL-3000data reduction
Cootmodel building
RESOLVEphasing
SHELXEmodel building
REFMACrefinement
DMphasing
Omodel building
MLPHAREphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2012-10-10
    Type: Initial release
  • Version 1.1: 2012-10-31
    Type: Database references, Structure summary
  • Version 1.2: 2017-11-15
    Type: Refinement description