4H73

Thermostable aldehyde dehydrogenase from Pyrobaculum sp. complexed with NADP+


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.261 
  • R-Value Work: 0.212 
  • R-Value Observed: 0.215 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Thermostable aldehyde dehydrogenase from Pyrobaculum sp. complexed with NADP+

Petrova, T.Shabalin, I.G.Bezsudnova, E.Y.Boyko, K.M.Mardanov, A.V.M Gumerov, V.Ravin, N.V.Popov, V.O.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Aldehyde dehydrogenase
A, B, C, D, E
A, B, C, D, E, F, G, H
491Pyrobaculum ferrireducensMutation(s): 0 
Gene Names: P186_1147
UniProt
Find proteins for G7VCG0 (Pyrobaculum ferrireducens)
Explore G7VCG0 
Go to UniProtKB:  G7VCG0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupG7VCG0
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
NDP
Query on NDP

Download Ideal Coordinates CCD File 
I [auth A]
K [auth B]
L [auth C]
N [auth D]
O [auth E]
I [auth A],
K [auth B],
L [auth C],
N [auth D],
O [auth E],
Q [auth F],
R [auth G],
T [auth H]
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
NI
Query on NI

Download Ideal Coordinates CCD File 
J [auth A],
M [auth C],
P [auth E],
S [auth G]
NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.261 
  • R-Value Work: 0.212 
  • R-Value Observed: 0.215 
  • Space Group: P 2 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 164.21α = 90
b = 183.77β = 90
c = 206.47γ = 90
Software Package:
Software NamePurpose
HKL-2000data collection
BALBESphasing
PHENIXrefinement
XDSdata reduction
XSCALEdata scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2013-10-02
    Type: Initial release
  • Version 1.1: 2018-01-24
    Changes: Structure summary