4H3V

Crystal structure of oxidoreductase domain protein from Kribbella flavida


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.68 Å
  • R-Value Free: 0.177 
  • R-Value Work: 0.144 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of oxidoreductase domain protein from Kribbella flavida

Michalska, K.Mack, J.C.McKnight, S.M.Endres, M.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Oxidoreductase domain protein
A, B
390Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)Mutation(s): 0 
Find proteins for D2PU28 (Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399))
Go to UniProtKB:  D2PU28
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FMT
Query on FMT

Download SDF File 
Download CCD File 
A, B
FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 70.597α = 90.00
b = 70.597β = 90.00
c = 288.538γ = 90.00
Software Package:
Software NamePurpose
SHELXphasing
HKL-3000data scaling
DMphasing
DMmodel building
MLPHAREphasing
SHELXmodel building
BUCCANEERmodel building
SBC-Collectdata collection
Cootmodel building
PHENIXrefinement
HKL-3000data reduction
BUCCANEERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2012-09-26
    Type: Initial release