4H20

Crystal Structure and Computational Modeling of the Fab Fragment from the Protective anti-Ricin Monoclonal Antibody RAC18


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.223 
  • R-Value Work: 0.195 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure and computational modeling of the fab fragment from a protective anti-ricin monoclonal antibody.

Zhao, Z.Worthylake, D.Lecour, L.Maresh, G.A.Pincus, S.H.

(2012) Plos One 7: e52613-e52613

  • DOI: 10.1371/journal.pone.0052613

  • PubMed Abstract: 
  • Many antibody crystal structures have been solved. Structural modeling programs have been developed that utilize this information to predict 3-D structures of an antibody based upon its sequence. Because of the problem of self-reference, the accuracy ...

    Many antibody crystal structures have been solved. Structural modeling programs have been developed that utilize this information to predict 3-D structures of an antibody based upon its sequence. Because of the problem of self-reference, the accuracy and utility of these predictions can only be tested when a new structure has not yet been deposited in the Protein Data Bank.


    Organizational Affiliation

    The Research Institute for Children, Children's Hospital, New Orleans, Louisiana, United States of America.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Light chain of Fab Fragment from the anti-Ricin Monoclonal Antibody RAC18
L
214N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Heavy chain of Fab Fragment from the anti-Ricin Monoclonal Antibody RAC18
H
220N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.223 
  • R-Value Work: 0.195 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 39.640α = 90.00
b = 85.930β = 90.00
c = 130.070γ = 90.00
Software Package:
Software NamePurpose
PROTEUM PLUSdata scaling
PROTEUM PLUSdata collection
PROTEUM PLUSdata reduction
CNSrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2012-10-10
    Type: Initial release
  • Version 1.1: 2013-01-16
    Type: Database references
  • Version 1.2: 2017-11-15
    Type: Refinement description