4GZ7

The crystal structure of Apo-dihydropyrimidinase from Tetraodon nigroviridis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.195 
  • R-Value Work: 0.159 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Lysine Carboxylation: Metal and Structure Requirements for Post-translational Modification

Hsien, Y.C.Chen, M.C.Hsu, C.C.Chan, S.I.Yang, Y.S.Chen, C.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
dihydropyrimidinase
A
500Tetraodon nigroviridisMutation(s): 0 
Find proteins for H3C542 (Tetraodon nigroviridis)
Go to UniProtKB:  H3C542
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MHA
Query on MHA

Download SDF File 
Download CCD File 
A
(CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID
N-(2-ACETAMIDO)IMINODIACETIC ACID
C6 H10 N2 O5
QZTKDVCDBIDYMD-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.195 
  • R-Value Work: 0.159 
  • Space Group: I 41 2 2
Unit Cell:
Length (Å)Angle (°)
a = 160.823α = 90.00
b = 160.823β = 90.00
c = 94.547γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data reduction
HKL-2000data collection
MOLREPphasing
HKL-2000data scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-09-11
    Type: Initial release