4GOO

Crystal Structure of E. coli DNA Adenine Methyltransferase in Complex with Benzothiophene Aza-SAM


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.241 
  • R-Value Work: 0.211 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structural Basis of Selective N-6 adenine methyltransferase Inhibition by Transition State Mimic

Harmer, J.E.McKelvie, J.C.Hobley, G.Roach, P.L.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
DNA adenine methylase
D, E, F
278Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: dam
EC: 2.1.1.72
Find proteins for P0AEE8 (Escherichia coli (strain K12))
Go to UniProtKB:  P0AEE8
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
0Y2
Query on 0Y2

Download SDF File 
Download CCD File 
D, E, F
5'-{[(3S)-3-amino-3-carboxypropyl][2-(1-benzothiophen-3-yl)ethyl]amino}-5'-deoxyadenosine
C24 H29 N7 O5 S
FSMQALLDUCWVDV-PISIQOCNSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.241 
  • R-Value Work: 0.211 
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 161.460α = 90.00
b = 161.460β = 90.00
c = 95.214γ = 120.00
Software Package:
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
SCALAdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-02-26
    Type: Initial release