4GKP

Structure of the truncated neck and C-terminal motor homology domain of ViK1 from Candida glabrata


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.42 Å
  • R-Value Free: 0.259 
  • R-Value Work: 0.209 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Neck Rotation and Neck Mimic Docking in the Noncatalytic Kar3-associated Protein Vik1.

Duan, D.Jia, Z.Joshi, M.Brunton, J.Chan, M.Drew, D.Davis, D.Allingham, J.S.

(2012) J.Biol.Chem. 287: 40292-40301

  • DOI: 10.1074/jbc.M112.416529
  • Primary Citation of Related Structures:  4GKQ, 4GKR

  • PubMed Abstract: 
  • Kar3Vik1 is a heterodimeric kinesin with one catalytic subunit (Kar3) and one noncatalytic subunit (Vik1).

    Kar3Vik1 is a heterodimeric kinesin with one catalytic subunit (Kar3) and one noncatalytic subunit (Vik1).


    Organizational Affiliation

    Department of Biomedical and Molecular Sciences, Queen's University, Kingston, Ontario K7L 3N6, Canada.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Spindle pole body-associated protein VIK1
A, B
275Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)Gene Names: VIK1
Find proteins for Q6FSG8 (Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65))
Go to UniProtKB:  Q6FSG8
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.42 Å
  • R-Value Free: 0.259 
  • R-Value Work: 0.209 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 66.742α = 90.00
b = 77.722β = 90.00
c = 107.737γ = 90.00
Software Package:
Software NamePurpose
XSCALEdata scaling
XDSdata reduction
REFMACrefinement
PHASERphasing
PDB_EXTRACTdata extraction
Blu-Icedata collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2012-10-03
    Type: Initial release
  • Version 1.1: 2012-10-17
    Type: Database references
  • Version 1.2: 2012-12-12
    Type: Database references
  • Version 1.3: 2017-11-15
    Type: Refinement description