4GDY

Kynurenine Aminotransferase II inhibitors


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.89 Å
  • R-Value Free: 0.240 
  • R-Value Work: 0.171 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Discovery of Hydroxamate Bioisosteres as KATII Inhibitors with Improved Oral Bioavailability and Pharmacokinetics

Verhoest, P.R.Henderson, J.L.Sawant-Basak, A.Tuttle, J.B.Dounay, A.B.McAllister, L.A.Pandit, J.Rong, S.Hou, X.Bechle, B.Parikh, V.Evrard, E.Ghosh, S.Salafia, M.A.Rago, B.Obach, R.Fonseca, K.R.Chang, C.

(2012) MEDCHEMCOMM --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial
A, B
439Homo sapiensMutation(s): 2 
Gene Names: AADAT (KAT2)
Find proteins for Q8N5Z0 (Homo sapiens)
Go to Gene View: AADAT
Go to UniProtKB:  Q8N5Z0
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
0X1
Query on 0X1

Download SDF File 
Download CCD File 
A, B
(5-hydroxy-6-methyl-4-{[(1-oxo-7-phenoxy-1,2-dihydro[1,2,4]triazolo[4,3-a]quinolin-4-yl)amino]methyl}pyridin-3-yl)methyl dihydrogen phosphate
C24 H22 N5 O7 P
AMDYNPYMOMDDSQ-UHFFFAOYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
0X1IC50: 84 nM PDBBIND
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.89 Å
  • R-Value Free: 0.240 
  • R-Value Work: 0.171 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 116.457α = 90.00
b = 116.457β = 90.00
c = 115.211γ = 120.00
Software Package:
Software NamePurpose
SCALAdata scaling
BUSTERrefinement
PHASERphasing
PDB_EXTRACTdata extraction
JDirectordata collection
BUSTER-TNTrefinement
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2012-08-01 
  • Released Date: 2012-08-29 
  • Deposition Author(s): Pandit, J.

Revision History 

  • Version 1.0: 2012-08-29
    Type: Initial release