4FZS | pdb_00004fzs

Structure of human SNX1 BAR domain

• PDB DOI: https://doi.org/10.2210/pdb4FZS/pdb

• Classification: PROTEIN TRANSPORT
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2012-07-07 Released: 2013-07-10 
• Deposition Author(s): van Weering, J.R.T., Sessions, R.B., Traer, C.J., Kloer, D.P., Bhatia, V.K., Stamou, D., Hurley, J.H., Cullen, P.J.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.80 Å
• R-Value Free: 
  0.258 (Depositor), 0.289 (DCC) 
• R-Value Work: 
  0.228 (Depositor), 0.248 (DCC) 
• R-Value Observed: 
  0.230 (Depositor) 

Literature

Molecular insight into vesicle-to-tubule membrane remodeling by SNX-BAR proteins

van Weering, J.R.T., Sessions, R.B., Traer, C.J., Kloer, D.P., Bhatia, V.K., Stamou, D., Hurley, J.H., Cullen, P.J.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 53.05 kDa 
• Atom Count: 3,341 
• Modeled Residue Count: 398 
• Deposited Residue Count: 448 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Sorting nexin-1	A, B	224	Homo sapiens	Mutation(s): 0  Gene Names: SNX1
UniProt & NIH Common Fund Data Resources
Find proteins for Q13596 (Homo sapiens) Explore Q13596  Go to UniProtKB:  Q13596
PHAROS:  Q13596 GTEx:  ENSG00000028528

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.80 Å
• R-Value Free:  0.258 (Depositor), 0.289 (DCC) 
• R-Value Work:  0.228 (Depositor), 0.248 (DCC) 
• R-Value Observed: 0.230 (Depositor) 

Space Group: P 2₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 88.99	α = 90
b = 118.09	β = 90
c = 61.54	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data collection
SHARP	phasing
BUSTER	refinement
XDS	data reduction
XSCALE	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2013-07-10 
Deposition Author(s): van Weering, J.R.T., Sessions, R.B., Traer, C.J., Kloer, D.P., Bhatia, V.K., Stamou, D., Hurley, J.H., Cullen, P.J.

Revision History  

• Version 1.0: 2013-07-10
  Type: Initial release
  
• Version 1.1: 2024-02-28
  Changes: Data collection, Database references