4F44

Neurotrophin p75NTR intracellular domain

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.280 
  • R-Value Work: 0.228 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history. 

Literature

Structural insights into the allosteric activation mechanism of p75NTR

Qu, Q., Jiang, T.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Tumor necrosis factor receptor superfamily member 16
A, B
94Rattus norvegicusMutation(s): 0 
Gene Names: Ngfr (Tnfrsf16)
Find proteins for P07174 (Rattus norvegicus)
Go to UniProtKB:  P07174
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MNB
Query on MNB
Download SDF File 
Download CCD File 
A, B
5-MERCAPTO-2-NITRO-BENZOIC ACID
C7 H5 N O4 S
GANZODCWZFAEGN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.280 
  • R-Value Work: 0.228 
  • Space Group: P 32
Unit Cell:
Length (Å)Angle (°)
a = 53.372α = 90.00
b = 53.372β = 90.00
c = 73.486γ = 120.00
Software Package:
Software NamePurpose
HKL-2000data reduction
MOLREPphasing
HKL-2000data collection
REFMACrefinement
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots


View more in-depth experimental data

Entry History 

Deposition Data

  • Deposited Date: 2012-05-10 
  • Released Date: 2013-05-15 
  • Deposition Author(s): Qu, Q., Jiang, T.

Revision History 

  • Version 1.0: 2013-05-15
    Type: Initial release
  • Version 1.1: 2013-05-22
    Type: Refinement description