4F42

Neurotrophin p75NTR intracellular domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.38 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.219 
  • R-Value Observed: 0.221 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structural insights into the allosteric activation mechanism of p75NTR

Qu, Q.Jiang, T.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Tumor necrosis factor receptor superfamily member 16A94Rattus norvegicusMutation(s): 0 
Gene Names: NgfrNM_012610Tnfrsf16
UniProt
Find proteins for P07174 (Rattus norvegicus)
Explore P07174 
Go to UniProtKB:  P07174
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MNB
Query on MNB

Download Ideal Coordinates CCD File 
B [auth A], C [auth A]5-MERCAPTO-2-NITRO-BENZOIC ACID
C7 H5 N O4 S
GANZODCWZFAEGN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.38 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.219 
  • R-Value Observed: 0.221 
  • Space Group: P 43 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 53.44α = 90
b = 53.44β = 90
c = 78.41γ = 90
Software Package:
Software NamePurpose
CrystalCleardata collection
MOLREPphasing
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

  • Deposited Date: 2012-05-09 
  • Released Date: 2013-05-15 
  • Deposition Author(s): Qu, Q., Jiang, T.

Revision History  (Full details and data files)

  • Version 1.0: 2013-05-15
    Type: Initial release