4F42

Neurotrophin p75NTR intracellular domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.38 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.219 
  • R-Value Observed: 0.221 

wwPDB Validation 3D Report Full Report



Literature

Structural insights into the allosteric activation mechanism of p75NTR

Qu, Q.Jiang, T.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Tumor necrosis factor receptor superfamily member 16
A
94Rattus norvegicusMutation(s): 0 
Gene Names: NgfrNM_012610Tnfrsf16
Find proteins for P07174 (Rattus norvegicus)
Go to UniProtKB:  P07174
Protein Feature View
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MNB
Query on MNB

Download CCD File 
A
5-MERCAPTO-2-NITRO-BENZOIC ACID
C7 H5 N O4 S
GANZODCWZFAEGN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.38 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.219 
  • R-Value Observed: 0.221 
  • Space Group: P 43 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 53.44α = 90
b = 53.44β = 90
c = 78.41γ = 90
Software Package:
Software NamePurpose
CrystalCleardata collection
MOLREPphasing
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

  • Deposited Date: 2012-05-09 
  • Released Date: 2013-05-15 
  • Deposition Author(s): Qu, Q., Jiang, T.

Revision History 

  • Version 1.0: 2013-05-15
    Type: Initial release