Structures of a High-fidelity DNA Polymerase
Wang, W., Hellinga, H.W., Beese, L.S.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Find similar proteins by: Sequence  |  Structure
Entity ID: 1 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
DNA polymerase | A, D | 592 | Geobacillus kaustophilus (strain HTA426) | Mutation(s): 2  Gene Names: polA EC: 2.7.7.7 |
Find proteins for Q5KWC1 (Geobacillus kaustophilus (strain HTA426)) Go to UniProtKB:  Q5KWC1 |
Entity ID: 2 | ||||
---|---|---|---|---|
Molecule | Chains | Length | Organism | |
DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(DOC))-3') | B,E | 9 | synthetic construct |
Entity ID: 3 | ||||
---|---|---|---|---|
Molecule | Chains | Length | Organism | |
DNA (5'-D(*CP*AP*TP*GP*GP*GP*AP*GP*TP*CP*AP*GP*G)-3') | C,F | 13 | synthetic construct |
Ligands 4 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SUC Query on SUC | A, D | SUCROSE C12 H22 O11 CZMRCDWAGMRECN-UGDNZRGBSA-N | ![]() |  Ligand Interaction | |
MN Query on MN | D | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N | ![]() |  Ligand Interaction | |
SO4 Query on SO4 | D | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | ![]() |  Ligand Interaction | |
CTP Query on CTP | A, D | CYTIDINE-5'-TRIPHOSPHATE C9 H16 N3 O14 P3 PCDQPRRSZKQHHS-XVFCMESISA-N | ![]() |  Ligand Interaction |
Modified Residues  1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
DOC Query on DOC | B, E | DNA LINKING | C9 H14 N3 O6 P | ![]() | DC |
Length (Å) | Angle (°) |
---|---|
a = 93.180 | α = 90.00 |
b = 108.590 | β = 90.00 |
c = 150.990 | γ = 90.00 |
Software Name | Purpose |
---|---|
XSCALE | data scaling |
XDS | data reduction |
PHENIX | refinement |
PDB_EXTRACT | data extraction |