4ERU

Crystal Structure of Putative Cytoplasmic Protein, YciF Bacterial Stress Response Protein from Salmonella enterica


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.173 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal Structure of Putative Cytoplasmic Protein, YciF Bacterial Stress Response Protein from Salmonella enterica

Kim, Y.Wu, R.Jedrzejczak, R.Brown, R.N.Cort, J.R.Heffron, F.Nakayasu, E.S.Adkins, J.N.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
YciF Bacterial Stress Response Protein
A, B
170Salmonella typhimurium (strain 14028s / SGSC 2262)Mutation(s): 0 
Gene Names: yciF
Find proteins for A0A0F6B221 (Salmonella typhimurium (strain 14028s / SGSC 2262))
Go to UniProtKB:  A0A0F6B221
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MLT
Query on MLT

Download SDF File 
Download CCD File 
A, B
D-MALATE
(2R)-2-HYDROXYBUTANEDIOIC ACID; 2-HYDROXY-SUCCINIC ACID
C4 H6 O5
BJEPYKJPYRNKOW-UWTATZPHSA-N
 Ligand Interaction
MG
Query on MG

Download SDF File 
Download CCD File 
A, B
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 107.138α = 90.00
b = 107.138β = 90.00
c = 59.935γ = 120.00
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-3000data reduction
SBC-Collectdata collection
HKL-3000data collection
HKL-3000data scaling
BUCCANEERphasing
SHELXSphasing
HKL-3000phasing
MLPHAREphasing
BUCCANEERmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2012-06-06
    Type: Initial release