4ENO

Crystal structure of oxidized human nm23-H1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.182 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of Nm23-H1 under oxidative conditions

Kim, M.-S.Jeong, J.Jeong, J.Shin, D.-H.Lee, K.-J.

(2013) Acta Crystallogr.,Sect.D 69: 669-680


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Nucleoside diphosphate kinase A
A, B
152Homo sapiensMutation(s): 0 
Gene Names: NME1 (NDPKA, NM23)
EC: 2.7.4.6
Find proteins for P15531 (Homo sapiens)
Go to Gene View: NME1
Go to UniProtKB:  P15531
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download SDF File 
Download CCD File 
A, B
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.182 
  • Space Group: P 21 3
Unit Cell:
Length (Å)Angle (°)
a = 106.768α = 90.00
b = 106.768β = 90.00
c = 106.768γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data reduction
CNSrefinement
SCALEPACKdata scaling
ADSCdata collection
EPMRphasing
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-03-27
    Type: Initial release