4EMY

Crystal structure of aminotransferase from anaerococcus prevotii dsm 20548.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.86 Å
  • R-Value Free: 0.290 
  • R-Value Work: 0.245 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of aminotransferase from anaerococcus prevotii dsm 20548.

Chang, C.Tesar, C.Bearden, J.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Aminotransferase class I and II
A, B, C, D
413Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1)Mutation(s): 0 
Find proteins for C7REB0 (Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1))
Go to UniProtKB:  C7REB0
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PLP
Query on PLP

Download SDF File 
Download CCD File 
A, B, C, D
PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate
C8 H10 N O6 P
NGVDGCNFYWLIFO-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 64.297α = 90.00
b = 131.178β = 90.00
c = 239.913γ = 90.00
Software Package:
Software NamePurpose
DMphasing
ARP/wARPmodel building
PDB_EXTRACTdata extraction
SHELXDEphasing
Cootmodel building
MLPHAREphasing
HKL-3000data scaling
HKL-3000phasing
RESOLVEphasing
REFMACrefinement
HKL-3000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2012-05-09
    Type: Initial release