4E5Y

Structure of human FX protein, the key enzyme in the biosynthesis of GDP-L-fucose


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.37 Å
  • R-Value Free: 0.291 
  • R-Value Work: 0.232 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of human FX protein, the key enzyme in the biosynthesis of GDP-L-fucose

Zhou, H.He, J.H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
GDP-L-fucose synthase
A, B, C, D
321Homo sapiensGene Names: TSTA3 (SDR4E1)
EC: 1.1.1.271
Find proteins for Q13630 (Homo sapiens)
Go to Gene View: TSTA3
Go to UniProtKB:  Q13630
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NDP
Query on NDP

Download SDF File 
Download CCD File 
A, B, C, D
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.37 Å
  • R-Value Free: 0.291 
  • R-Value Work: 0.232 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 85.772α = 90.00
b = 136.440β = 90.00
c = 139.849γ = 90.00
Software Package:
Software NamePurpose
ADSCdata collection
PHENIXphasing
HKL-2000data reduction
HKL-2000data scaling
PHENIXrefinement
PHENIXmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2012-03-15 
  • Released Date: 2013-04-17 
  • Deposition Author(s): Zhou, H., He, J.H.

Revision History 

  • Version 1.0: 2013-04-17
    Type: Initial release