4E45

Crystal structure of the hMHF1/hMHF2 Histone-Fold Tetramer in Complex with Fanconi Anemia Associated Helicase hFANCM


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.245 
  • R-Value Work: 0.202 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structures Reveal that FANCM remodels the MHF Tetramer in favor of binding Branched DNA

Fox III, D.Yan, Z.Ling, C.Zhao, Y.Lee, D.Y.Yang, W.Weidong, W.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Centromere protein S
A, C, F, H, K, M
112Homo sapiensMutation(s): 0 
Gene Names: CENPS (APITD1, FAAP16, MHF1)
Find proteins for Q8N2Z9 (Homo sapiens)
Go to Gene View: CENPS
Go to UniProtKB:  Q8N2Z9
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Centromere protein X
B, D, G, I, L, N
83Homo sapiensMutation(s): 0 
Gene Names: CENPX (FAAP10, MHF2, STRA13)
Find proteins for A8MT69 (Homo sapiens)
Go to Gene View: CENPX
Go to UniProtKB:  A8MT69
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
Fanconi anemia group M protein
E, J, O
137Homo sapiensMutation(s): 0 
Gene Names: FANCM (KIAA1596)
EC: 3.6.4.13
Find proteins for Q8IYD8 (Homo sapiens)
Go to Gene View: FANCM
Go to UniProtKB:  Q8IYD8
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
D, J, N
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
GOL
Query on GOL

Download SDF File 
Download CCD File 
B, H
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.245 
  • R-Value Work: 0.202 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 110.980α = 90.00
b = 69.970β = 91.60
c = 116.050γ = 90.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
Blu-Icedata collection
XDSdata reduction
XSCALEdata scaling
REFMACrefinement
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-03-20
    Type: Initial release
  • Version 1.1: 2018-01-24
    Type: Database references