4DU5

Crystal structure of PfkB protein from Polaromonas sp. JS666


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.296 
  • R-Value Work: 0.226 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of PfkB protein from Polaromonas sp. JS666

Agarwal, R.Almo, S.C.Swaminathan, S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PfkB
A, B, C, D
336Polaromonas sp. (strain JS666 / ATCC BAA-500)Mutation(s): 0 
Find proteins for Q12CR9 (Polaromonas sp. (strain JS666 / ATCC BAA-500))
Go to UniProtKB:  Q12CR9
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download SDF File 
Download CCD File 
A, C
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.296 
  • R-Value Work: 0.226 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 82.923α = 90.00
b = 83.084β = 90.00
c = 196.202γ = 90.00
Software Package:
Software NamePurpose
ARPmodel building
HKL-2000data reduction
HKL-2000data scaling
AutoSolphasing
Cootmodel building
CBASSdata collection
REFMACrefinement
MOLREPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2012-03-21
    Type: Initial release
  • Version 1.1: 2017-11-15
    Type: Refinement description