4DB5

Crystal structure of Rabbit GITRL


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.522 Å
  • R-Value Free: 0.176 
  • R-Value Work: 0.161 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of GITRL from Oryctolagus cuniculus

Kumar, P.R.Bhosle, R.Gizzi, A.Scott Glenn, A.Chowhury, S.Hillerich, B.Seidel, R.Nathenson, S.G.Almo, S.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Tumor necrosis factor ligand superfamily member 18
A
125Oryctolagus cuniculusMutation(s): 0 
Gene Names: TNFSF18
Find proteins for G1TIM1 (Oryctolagus cuniculus)
Go to Gene View: TNFSF18
Go to UniProtKB:  G1TIM1
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
B3P
Query on B3P

Download SDF File 
Download CCD File 
A
2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
C11 H26 N2 O6
HHKZCCWKTZRCCL-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.522 Å
  • R-Value Free: 0.176 
  • R-Value Work: 0.161 
  • Space Group: F 2 3
Unit Cell:
Length (Å)Angle (°)
a = 127.047α = 90.00
b = 127.047β = 90.00
c = 127.047γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
SCALEPACKdata scaling
PHENIXphasing
CBASSdata collection
PDB_EXTRACTdata extraction
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2012-03-21
    Type: Initial release
  • Version 1.1: 2012-06-06
    Type: Structure summary