4DAV

The structure of Pyrococcus Furiosus SfsA in complex with DNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.298 
  • R-Value Work: 0.240 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

The structure of SfsA and its DNA complex; A DNA/RNA nuclease with a novel domain combination

Allen, F.L.Akerboom, J.Bliss, S.J.Blombach, F.Sedelnikova, S.E.van der Oost, J.Baker, P.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Sugar fermentation stimulation protein homolog
A, B
231Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)Mutation(s): 1 
Gene Names: sfsA
Find proteins for Q8U1K8 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1))
Go to UniProtKB:  Q8U1K8
Entity ID: 2
MoleculeChainsLengthOrganism
5'-D(*CP*GP*CP*TP*GP*TP*CP*TP*CP*GP*CP*T)-3'X,D12N/A
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.298 
  • R-Value Work: 0.240 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 80.700α = 90.00
b = 42.690β = 104.92
c = 88.900γ = 90.00
Software Package:
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing
REFMACrefinement
GDAdata collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-10-01
    Type: Initial release