Pamurf in Complex with Udp-Murnac-Tripeptide (Mdap)
Majce, V., Ruane, K.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | 475 | Pseudomonas aeruginosa PAO1 | Mutation(s): 0  Gene Names: murF | ||
UniProt | |||||
Find proteins for Q9HVZ7 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9HVZ7  Go to UniProtKB:  Q9HVZ7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9HVZ7 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ALA-FGA-API | 3 | synthetic construct | Mutation(s): 0  | ||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
UDP Query on UDP | C [auth A] | URIDINE-5'-DIPHOSPHATE C9 H14 N2 O12 P2 XCCTYIAWTASOJW-XVFCMESISA-N | |||
MUB Query on MUB | D [auth A] | N-acetyl-alpha-muramic acid C11 H19 N O8 MNLRQHMNZILYPY-MDMHTWEWSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
API Query on API | B | L-PEPTIDE LINKING | C7 H14 N2 O4 | LYS |
Length ( Å ) | Angle ( ˚ ) |
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a = 57.81 | α = 90 |
b = 87.29 | β = 90 |
c = 92.61 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
xia2 | data reduction |
xia2 | data scaling |
PHASER | phasing |