4CNP

Structure of the Salmonella typhi type I dehydroquinase inhibited by a 3-epiquinic acid derivative


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.160 
  • R-Value Work: 0.133 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Mechanistic Insight Into the Reaction Catalyzed by Type I Dehydroquinase

Maneiro, M.Peon, A.Lence, E.Otero, J.M.Llamas-Saiz, A.L.van Raaij, M.J.Lamb, H.Hawkins, A.R.Gonzalez-Bello, C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
3-DEHYDROQUINATE DEHYDRATASE
A, B
252Salmonella typhiMutation(s): 0 
Gene Names: aroD
EC: 4.2.1.10
Find proteins for P24670 (Salmonella typhi)
Go to UniProtKB:  P24670
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NA
Query on NA

Download SDF File 
Download CCD File 
A, B
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
CL
Query on CL

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Download CCD File 
B
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
9C4
Query on 9C4

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Download CCD File 
A, B
(2S)-2-HYDROXY-3-EPIQUINIC ACID
C7 H12 O7
OLBQNCISLUABGO-LNHNIDQWSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.160 
  • R-Value Work: 0.133 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 60.216α = 90.00
b = 44.473β = 95.20
c = 84.702γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
XDSdata reduction
SCALEdata scaling
MOLREPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-02-18
    Type: Initial release
  • Version 1.1: 2018-01-24
    Type: Database references