4CF6

Crystal structure of the complex of the P187S variant of human NAD(P) H:quinone oxidoreductase with Cibacron blue at 2.7 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.694 Å
  • R-Value Free: 0.207 
  • R-Value Work: 0.185 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Collapse of the Native Structure by a Single Amino Acid Exchange in Human Nad(P)H:Quinone Oxidoreductase (Nqo1).

Lienhart, W.D.Gudipati, V.Uhl, M.K.Binter, A.Pulido, S.Saf, R.Zangger, K.Gruber, K.Macheroux, P.

(2014) FEBS J. 281: 4691


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
NAD(P)H DEHYDROGENASE [QUINONE] 1
A, B
294Homo sapiensMutation(s): 1 
Gene Names: NQO1 (DIA4, NMOR1)
EC: 1.6.5.2
Find proteins for P15559 (Homo sapiens)
Go to Gene View: NQO1
Go to UniProtKB:  P15559
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FAD
Query on FAD

Download SDF File 
Download CCD File 
A, B
FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
 Ligand Interaction
CBD
Query on CBD

Download SDF File 
Download CCD File 
A, B
CIBACRON BLUE
C29 H20 Cl N7 O11 S3
YKCWQPZFAFZLBI-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.694 Å
  • R-Value Free: 0.207 
  • R-Value Work: 0.185 
  • Space Group: I 2 2 2
Unit Cell:
Length (Å)Angle (°)
a = 104.167α = 90.00
b = 104.563β = 90.00
c = 118.566γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
PHASERphasing
SCALAdata scaling
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-08-27
    Type: Initial release
  • Version 1.1: 2014-09-03
    Type: Database references
  • Version 1.2: 2014-10-29
    Type: Database references
  • Version 1.3: 2017-09-27
    Type: Data collection