4C7U

Crystal structure of manganese superoxide dismutase from Arabidopsis thaliana


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.951 Å
  • R-Value Work: 0.173 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal Structure of the Arabidopsis Thaliana Manganese Superoxide Dismutase at 1.95 A Resolution

Marques, A.Santos, S.P.Rosa, M.Carrondo, M.A.Abreu, I.A.Romao, C.V.Frazao, C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
SUPEROXIDE DISMUTASE [MN] 1, MITOCHONDRIAL
A, B, C, D, E, F, G, H
225Arabidopsis thalianaMutation(s): 0 
Gene Names: MSD1 (MEE3, SODA)
EC: 1.15.1.1
Find proteins for O81235 (Arabidopsis thaliana)
Go to UniProtKB:  O81235
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MN
Query on MN

Download SDF File 
Download CCD File 
A, B, C, D, E, F, G, H
MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.951 Å
  • R-Value Work: 0.173 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 58.952α = 90.55
b = 59.181β = 90.51
c = 107.980γ = 89.85
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XDSdata scaling
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-10-15
    Type: Initial release
  • Version 1.1: 2017-09-06
    Type: Data collection
  • Version 1.2: 2019-01-30
    Type: Data collection, Experimental preparation
  • Version 1.3: 2019-02-06
    Type: Data collection, Experimental preparation