4BBQ

Crystal structure of the CXXC and PHD domain of Human Lysine-specific Demethylase 2A (KDM2A)(FBXL11)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.24 Å
  • R-Value Free: 0.221 
  • R-Value Work: 0.197 
  • R-Value Observed: 0.198 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Crystal Structure of the Cxxc and Phd Domain of Human Lysine-Specific Demethylase 2A (Kdm2A)(Fbxl11)

Allerston, C.K.Watson, A.A.Edlich, C.Li, B.Chen, Y.Ball, L.Krojer, T.Arrowsmith, C.H.Edwards, A.Bountra, C.von Delft, F.Laue, E.D.Gileadi, O.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
LYSINE-SPECIFIC DEMETHYLASE 2AA, B117Homo sapiensMutation(s): 0 
Gene Names: KDM2ACXXC8FBL11FBL7FBXL11JHDM1AKIAA1004
EC: 1.14.11.27
UniProt & NIH Common Fund Data Resources
Find proteins for Q9Y2K7 (Homo sapiens)
Explore Q9Y2K7 
Go to UniProtKB:  Q9Y2K7
PHAROS:  Q9Y2K7
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.24 Å
  • R-Value Free: 0.221 
  • R-Value Work: 0.197 
  • R-Value Observed: 0.198 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 49.024α = 90
b = 30.053β = 91.66
c = 90.824γ = 90
Software Package:
Software NamePurpose
BUSTERrefinement
AutoPROCdata reduction
AP_SCALEdata scaling
SHARPphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2012-10-10
    Type: Initial release
  • Version 1.1: 2018-01-24
    Changes: Database references, Structure summary