4BA9

The structural basis for the coordination of Y-family Translesion DNA Polymerases by Rev1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.73 Å
  • R-Value Free: 0.250 
  • R-Value Work: 0.214 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

The Structural Basis for the Coordination of Y- Family Translesion DNA Polymerases by Rev1

Grummitt, C.G.Kilkenny, M.L.Frey, A.Roe, S.M.Oliver, A.W.Sale, J.E.Pearl, L.H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
DNA POLYMERASE KAPPA, DNA REPAIR PROTEIN REV1
A, B, C, D, E, F
114Homo sapiensMutation(s): 0 
Gene Names: POLK (DINB1), REV1 (REV1L)
EC: 2.7.7.7 2.7.7.-
Find proteins for Q9UBT6 (Homo sapiens)
Go to Gene View: POLK
Go to UniProtKB:  Q9UBT6
Find proteins for Q9UBZ9 (Homo sapiens)
Go to Gene View: REV1
Go to UniProtKB:  Q9UBZ9
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MG
Query on MG

Download SDF File 
Download CCD File 
A, B, C, D, E, F
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
NI
Query on NI

Download SDF File 
Download CCD File 
A, B, D, E, F
NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.73 Å
  • R-Value Free: 0.250 
  • R-Value Work: 0.214 
  • Space Group: H 3 2
Unit Cell:
Length (Å)Angle (°)
a = 105.750α = 90.00
b = 105.750β = 90.00
c = 424.270γ = 120.00
Software Package:
Software NamePurpose
BUSTERrefinement
SHELXphasing
SHARPphasing
XDSdata reduction
SCALAdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-09-25
    Type: Initial release
  • Version 1.1: 2017-03-15
    Type: Source and taxonomy