4ARY

Lepidopteran-specific toxin Cry1Ac in complex with receptor specificity determinant GalNAc


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.95 Å
  • R-Value Free: 0.244 
  • R-Value Work: 0.215 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structural Basis of Galnac-Dependent Receptor Recognition by B. Thuringiensis Toxin Cry1Ac

Derbyshire, D.J.Carroll, J.Ellar, D.J.Li, J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PESTICIDAL CRYSTAL PROTEIN CRY1AC
A, B, C, D
581Bacillus thuringiensis subsp. kurstakiMutation(s): 0 
Gene Names: cry1Ac (cry1A(c), cry218, cryIA(c))
Find proteins for P05068 (Bacillus thuringiensis subsp. kurstaki)
Go to UniProtKB:  P05068
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
13D
Query on 13D

Download SDF File 
Download CCD File 
A, B
1,3-DIAMINOPROPANE
C3 H10 N2
XFNJVJPLKCPIBV-UHFFFAOYSA-N
 Ligand Interaction
NGA
Query on NGA

Download SDF File 
Download CCD File 
A, B, C, D
N-ACETYL-D-GALACTOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-JAJWTYFOSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.95 Å
  • R-Value Free: 0.244 
  • R-Value Work: 0.215 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 121.360α = 90.00
b = 51.190β = 105.75
c = 210.650γ = 90.00
Software Package:
Software NamePurpose
SCALAdata scaling
REFMACrefinement
MOSFLMdata reduction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-05-15
    Type: Initial release
  • Version 1.1: 2014-02-05
    Type: Database references
  • Version 1.2: 2019-01-30
    Type: Data collection, Experimental preparation, Other