3VYG

Crystal structure of Thiocyanate hydrolase mutant R136W


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.72 Å
  • R-Value Free: 0.218 
  • R-Value Work: 0.187 
  • R-Value Observed: 0.189 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Effects of argnine residue around the substrate pocket on the substrate specificity of thiocyanate hydrolase

Yamanaka, Y.Sato, M.Arakawa, T.Namima, S.Hori, S.Ohtaki, A.Noguchi, K.Katayama, Y.Yohda, M.Odaka, M.

To be published.

Macromolecules
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Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Thiocyanate hydrolase subunit alphaA, D, G, J126Thiobacillus thioparusMutation(s): 0 
Gene Names: scnA
EC: 3.5.5.8
UniProt
Find proteins for O66187 (Thiobacillus thioparus)
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Go to UniProtKB:  O66187
Protein Feature View
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  • Reference Sequence
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Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Thiocyanate hydrolase subunit betaB, E, H, K157Thiobacillus thioparusMutation(s): 0 
Gene Names: scnB
EC: 3.5.5.8
UniProt
Find proteins for O66186 (Thiobacillus thioparus)
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Protein Feature View
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  • Reference Sequence
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Entity ID: 3
MoleculeChainsSequence LengthOrganismDetailsImage
Thiocyanate hydrolase subunit gammaC, F, I, L243Thiobacillus thioparusMutation(s): 1 
Gene Names: scnC
EC: 3.5.5.8
UniProt
Find proteins for O66188 (Thiobacillus thioparus)
Explore O66188 
Go to UniProtKB:  O66188
Protein Feature View
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  • Reference Sequence
Small Molecules
Modified Residues  2 Unique
IDChainsTypeFormula2D DiagramParent
CSD
Query on CSD
C, F, I, LL-PEPTIDE LINKINGC3 H7 N O4 SCYS
CSO
Query on CSO
C, F, I, LL-PEPTIDE LINKINGC3 H7 N O3 SCYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.72 Å
  • R-Value Free: 0.218 
  • R-Value Work: 0.187 
  • R-Value Observed: 0.189 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 113.448α = 90
b = 172.398β = 90
c = 172.531γ = 90
Software Package:
Software NamePurpose
HKL-2000data collection
MOLREPphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2013-11-13
    Type: Initial release