3RRL

Complex structure of 3-oxoadipate coA-transferase subunit A and B from Helicobacter pylori 26695


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.29 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.176 
  • R-Value Observed: 0.178 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Complex structure of 3-oxoadipate coA-transferase subunit A and B from Helicobacter pylori 26695

Nocek, B.Stein, A.Marshall, N.Jedrzejczak, R.Babnigg, G.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit AA, C235Helicobacter pyloriMutation(s): 0 
Gene Names: scoAHP_0691
EC: 2.8.3.5
Find proteins for P56006 (Helicobacter pylori (strain ATCC 700392 / 26695))
Explore P56006 
Go to UniProtKB:  P56006
Protein Feature View
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  • Reference Sequence

Find similar proteins by: Sequence  |  Structure

Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit BB, D207Helicobacter pyloriMutation(s): 0 
Gene Names: scoBHP_0692
EC: 2.8.3.5
Find proteins for P56007 (Helicobacter pylori (strain ATCC 700392 / 26695))
Explore P56007 
Go to UniProtKB:  P56007
Protein Feature View
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download CCD File 
C
GLYCEROL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A,CL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.29 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.176 
  • R-Value Observed: 0.178 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 156.392α = 90
b = 65.705β = 109.81
c = 104.74γ = 90
Software Package:
Software NamePurpose
SBC-Collectdata collection
PHENIXmodel building
MOLREPphasing
HKL-3000phasing
PHENIXrefinement
HKL-3000data reduction
HKL-3000data scaling
PHENIXphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-06-29
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2012-01-11
    Changes: Structure summary