3QJG

Epidermin biosynthesis protein EpiD from Staphylococcus aureus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.04 Å
  • R-Value Free: 0.263 
  • R-Value Work: 0.208 
  • R-Value Observed: 0.211 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Epidermin biosynthesis protein EpiD from Staphylococcus aureus.

Osipiuk, J.Makowska-Grzyska, M.Kwon, K.Anderson, W.F.Joachimiak, A.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Epidermin biosynthesis protein EpiD
A, B, C, D, E, F, G, H
A, B, C, D, E, F, G, H, I, J, K, L
175Staphylococcus aureus subsp. aureus COLMutation(s): 0 
Gene Names: epiDSACOL1875
Find proteins for A0A0H2WWM9 (Staphylococcus aureus (strain COL))
Explore A0A0H2WWM9 
Go to UniProtKB:  A0A0H2WWM9
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FMN
Query on FMN

Download Ideal Coordinates CCD File 
CA [auth K] , DA [auth L] , M [auth A] , P [auth B] , Q [auth C] , R [auth D] , U [auth E] , V [auth F] , 
CA [auth K],  DA [auth L],  M [auth A],  P [auth B],  Q [auth C],  R [auth D],  U [auth E],  V [auth F],  W [auth G],  X [auth H],  Y [auth I],  Z [auth J]
FLAVIN MONONUCLEOTIDE
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
 Ligand Interaction
CL
Query on CL

Download Ideal Coordinates CCD File 
AA [auth J], BA [auth J], N [auth A], O [auth A], S [auth D], T [auth D]CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 160.991α = 90
b = 111.256β = 97.25
c = 154.569γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
SBC-Collectdata collection
HKL-3000data reduction
HKL-3000data scaling
MOLREPphasing
HKL-3000phasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2011-02-09
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2017-11-08
    Changes: Refinement description