Macromolecule Content

Total Structure Weight: 30121.54
Atom Count: 2018
Residue Count: 262
Unique protein chains: 2

3QC8

Crystal Structure of FAF1 UBX Domain In Complex with p97/VCP N Domain Reveals The Conserved FcisP Touch-Turn Motif of UBX Domain Suffering Conformational Change

DOI: 10.2210/pdb3QC8/pdb

Classification: PROTEIN BINDING
Organism(s): Homo sapiens
Expression System: Escherichia coli

Deposited: 2011-01-15 Released: 2011-07-20
Deposition Author(s): Kim, K.H., Kang, W., Suh, S.W., Yang, J.K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.2 Å
R-Value Free: 0.250
R-Value Work: 0.216

wwPDB Validation3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Crystal structure of FAF1 UBX domain in complex with p97/VCP N domain reveals a conformational change in the conserved FcisP touch-turn motif of UBX domain

Kim, K.H., Kang, W., Suh, S.W., Yang, J.K.

(2011) Proteins 79: 2583-2587

PubMed: 21739474 Search on PubMed
DOI: 10.1002/prot.23073

Macromolecules

Find similar proteins by: Sequence | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
Transitional endoplasmic reticulum ATPase	A	178	Homo sapiens	Mutation(s): 0 Gene Names: VCP EC: 3.6.4.6
Find proteins for P55072 (Homo sapiens) Go to Gene View: VCP Go to UniProtKB: P55072
Protein Feature View Full Protein Feature View for P55072

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details
FAS-associated factor 1	B	84	Homo sapiens	Mutation(s): 0 Gene Names: FAF1 (UBXD12, UBXN3A)
Find proteins for Q9UNN5 (Homo sapiens) Go to Gene View: FAF1 Go to UniProtKB: Q9UNN5
Protein Feature View Full Protein Feature View for Q9UNN5

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.2 Å
R-Value Free: 0.250
R-Value Work: 0.216
Space Group: C 2 2 2₁

Unit Cell:

Length (Å)	Angle (°)
a = 58.070	α = 90.00
b = 72.740	β = 90.00
c = 130.590	γ = 90.00

Software Package:

Software Name	Purpose
MOSFLM	data reduction
SCALA	data scaling
PHASER	phasing
ADSC	data collection
REFMAC	refinement

Structure Validation

View Full Validation Report or Ramachandran Plots

Entry History

Deposition Data

Deposited Date: 2011-01-15
Released Date: 2011-07-20
Deposition Author(s): Kim, K.H., Kang, W., Suh, S.W., Yang, J.K.

Revision History

Version 1.0: 2011-07-20
Type: Initial release

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.