Download MendeleyMolecular basis of WNT Activation via the DIX-domain protein CCD1
Liu, Y.T., Dan, Q.J., Wang, J.W., Feng, Y.G., Chen, L., Liang, J., Li, Q.X., Lin, S.C., Wang, Z.X., Wu, J.W.To be published.
3PZ7
Crystal structure of Ccd1-DIX domain
- PDB DOI: 10.2210/pdb3PZ7/pdb
- Classification: SIGNALING PROTEIN
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2010-12-14 Released: 2010-12-29
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.44 Å
- R-Value Free: 0.275
- R-Value Work: 0.233
- R-Value Observed: 0.235
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Dixin | A | 91 | Homo sapiens | Mutation(s): 1 Gene Names: DIXDC1, CCD1, KIAA1735 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q155Q3 (Homo sapiens) Explore Q155Q3 Go to UniProtKB: Q155Q3 | |||||
PHAROS: Q155Q3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q155Q3 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | B [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.44 Å
- R-Value Free: 0.275
- R-Value Work: 0.233
- R-Value Observed: 0.235
- Space Group: P 61 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 62.576 | α = 90 |
| b = 62.576 | β = 90 |
| c = 77.722 | γ = 120 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data collection |
| SOLVE | phasing |
| PHENIX | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Deposited Date: 2010-12-14
- Released Date: 2010-12-29 Deposition Author(s): Liu, Y.T., Wang, J.W., Chen, L., Wu, J.W.
Revision History (Full details and data files)
- Version 1.0: 2010-12-29
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance
