Download MendeleyThe crystal structure of the putative cell surface hydrolase from Lactobacillus plantarum WCFS1
Zhang, R., Li, H., Cobb, G., Joachimiak, A.To be published.
3LP5
The crystal structure of the putative cell surface hydrolase from Lactobacillus plantarum WCFS1
- PDB DOI: https://doi.org/10.2210/pdb3LP5/pdb
- Classification: HYDROLASE
- Organism(s): Lactiplantibacillus plantarum
- Expression System: Escherichia coli BL21
- Mutation(s): No
- Deposited: 2010-02-04 Released: 2010-03-16
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.236
- R-Value Work: 0.175
- R-Value Observed: 0.178
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative cell surface hydrolase | A | 250 | Lactiplantibacillus plantarum | Mutation(s): 0 Gene Names: GI:28270776, lp_1165 |  |
UniProt | |||||
Find proteins for F9UMW5 (Lactiplantibacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)) Explore F9UMW5 Go to UniProtKB: F9UMW5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | F9UMW5 | ||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NA Query on NA | B [auth A], C [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.236
- R-Value Work: 0.175
- R-Value Observed: 0.178
- Space Group: P 21 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 51.68 | α = 90 |
| b = 122.154 | β = 90 |
| c = 38.659 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SBC-Collect | data collection |
| HKL-3000 | phasing |
| REFMAC | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
Entry History
Deposition Data
- Released Date: 2010-03-16 Deposition Author(s): Zhang, R., Li, H., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2010-03-16
Type: Initial release - Version 1.1: 2011-07-13
Changes: Advisory, Version format compliance
