Crystal Structure of LysR Substrate Binding Domain from Wolinella succinogenes
Kim, Y., Volkart, L., Bearden, J., Joachimiak, A.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
PUTATIVE PERIPLASMIC PROTEIN | 242 | Wolinella succinogenes | Mutation(s): 0  Gene Names: WS1370 | ||
UniProt | |||||
Find proteins for Q7M8V9 (Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / CCUG 13145 / JCM 31913 / LMG 7466 / NCTC 11488 / FDC 602W)) Explore Q7M8V9  Go to UniProtKB:  Q7M8V9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q7M8V9 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GSH Query on GSH | I [auth B] | GLUTATHIONE C10 H17 N3 O6 S RWSXRVCMGQZWBV-WDSKDSINSA-N | |||
CIT Query on CIT | J [auth C] | CITRIC ACID C6 H8 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-N | |||
GOL Query on GOL | D [auth A], E [auth A], G [auth A], H [auth B], K [auth C] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
ACY Query on ACY | F [auth A] | ACETIC ACID C2 H4 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
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a = 55.784 | α = 90 |
b = 81.29 | β = 103.32 |
c = 87.91 | γ = 90 |
Software Name | Purpose |
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SBC-Collect | data collection |
HKL-3000 | data collection |
HKL-3000 | phasing |
SHELXS | phasing |
MLPHARE | phasing |
RESOLVE | model building |
SOLVE | phasing |
PHENIX | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
RESOLVE | phasing |