Biological Assembly 1  

Global Symmetry: Dihedral - D3  (3D View)
Global Stoichiometry: Homo 6-mer - A6 

Biological assembly 1 generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 199.58 kDa 
• Atom Count: 12,282 
• Modelled Residue Count: 1,533 
• Deposited Residue Count: 1,710 
• Unique protein chains: 1

 3IS5

Crystal structure of CDPK kinase domain from toxoplasma Gondii, TGME49_018720

• PDB DOI: 10.2210/pdb3IS5/pdb

• Classification: TRANSFERASE
• Organism(s): Toxoplasma gondii ME49
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2009-08-25 Released: 2009-10-20 
• Deposition Author(s): Wernimont, A.K., Artz, J.D., Senisterra, G., MacKenzie, F., Hutchinson, A., Kozieradzki, I., Cossar, D., Bochkarev, A., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Hui, R., Lin, Y.H., Structural Genomics Consortium (SGC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.55 Å
• R-Value Free: 0.259 
• R-Value Work: 0.218 
• R-Value Observed: 0.220 

Literature

Crystal structure of CDPK kinase domain from toxoplasma Gondii, TGME49_018720

Wernimont, A.K., Artz, J.D., Senisterra, G., MacKenzie, F., Hutchinson, A., Kozieradzki, I., Cossar, D., Bochkarev, A., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Hui, R., Lin, Y.H.

To be published.

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Calcium-dependent protein kinase	A, B, C, D, E, F	285	Toxoplasma gondii ME49	Mutation(s): 0  Gene Names: TGME49_018720 EC: 2.7.11.17

Small Molecules

Ligands 4 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ANP	AA [auth F], G [auth A], L [auth B], O [auth C], R [auth D], V [auth E]	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER C10 H17 N6 O12 P3 PVKSNHVPLWYQGJ-KQYNXXCUSA-N
GOL	BA [auth F], I [auth A], K [auth A], N [auth B], S [auth D], T [auth D], W [auth E]	GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N
CA	H [auth A], P [auth C], Y [auth F]	CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N
MG	J [auth A], M [auth B], Q [auth C], U [auth D], X [auth E], Z [auth F]	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.55 Å
• R-Value Free: 0.259 
• R-Value Work: 0.218 
• R-Value Observed: 0.220 
• Space Group: P 3₂

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 113.973	α = 90
b = 113.973	β = 90
c = 153.471	γ = 120

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
REFMAC	refinement
PDB_EXTRACT	data extraction
HKL-2000	data collection
PHASER	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2009-10-20 
Deposition Author(s): Wernimont, A.K., Artz, J.D., Senisterra, G., MacKenzie, F., Hutchinson, A., Kozieradzki, I., Cossar, D., Bochkarev, A., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Hui, R., Lin, Y.H., Structural Genomics Consortium (SGC)

Revision History  

• Version 1.0: 2009-10-20
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Advisory, Refinement description, Source and taxonomy, Version format compliance
• Version 1.2: 2017-11-01
  Changes: Refinement description