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Download EndnoteCrystal structure of AsnC family transcriptional regulator from Agrobacterium tumefaciens
Cymborowski, M., Chruszcz, M., Luo, H., Xu, X., Savchenko, A., Edwards, A., Joachimiak, A., Minor, W.To be published.
3I4P
Crystal structure of AsnC family transcriptional regulator from Agrobacterium tumefaciens
- DOI: 10.2210/pdb3I4P/pdb
- Classification: transcription regulator
- Organism(s): Agrobacterium fabrum (strain C58 / ATCC 33970)
- Expression System: Escherichia coli BL21(DE3)
- Deposited: 2009-07-02 Released: 2009-07-28
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.3 Å
- R-Value Free: 0.214
- R-Value Work: 0.188
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Transcriptional regulator, AsnC family | A | 162 | Agrobacterium fabrum (strain C58 / ATCC 33970) | Mutation(s): 0 |
Find proteins for A9CIH8 (Agrobacterium fabrum (strain C58 / ATCC 33970)) Go to UniProtKB: A9CIH8 | ||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ACT Query on ACT | A | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | Ligand Interaction | |
| CL Query on CL | A | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | Ligand Interaction | |
| CA Query on CA | A | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.3 Å
- R-Value Free: 0.214
- R-Value Work: 0.188
- Space Group: I 4 2 2
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 141.833 | α = 90.00 |
| b = 141.833 | β = 90.00 |
| c = 50.283 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-3000 | phasing |
| SHELXE | model building |
| MLPHARE | phasing |
| RESOLVE | model building |
| Coot | model building |
| HKL-3000 | data collection |
| RESOLVE | phasing |
| HKL-3000 | data scaling |
| SHELXD | phasing |
| DM | phasing |
| DM | model building |
| CCP4 | phasing |
| HKL-2000 | data reduction |
| ARP | model building |
| HKL-3000 | data reduction |
Entry History
Deposition Data
- Deposited Date: 2009-07-02
- Released Date: 2009-07-28
- Deposition Author(s): Cymborowski, M., Chruszcz, M., Luo, H., Xu, X., Savchenko, A., Edwards, A., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
