3F2K

Structure of the transposase domain of human Histone-lysine N-methyltransferase SETMAR


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.205 
  • R-Value Observed: 0.208 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

The Crystal Structure of Transposase Domain of Human Histone-lysine N-methyltransferase SETMAR.

Dombrovski, L.Amaya, M.F.Ni, S.Bountra, C.Weigelt, J.Arrowsmith, C.H.Edwards, A.M.Botchkarev, A.Min, J.Plotnikov, A.N.Wu, H.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Histone-lysine N-methyltransferase SETMARAB226Homo sapiensMutation(s): 0 
Gene Names: SETMAR
EC: 2.1.1.43 (PDB Primary Data), 2.1.1.357 (UniProt), 3.1 (UniProt)
Find proteins for Q53H47 (Homo sapiens)
Explore Q53H47 
Go to UniProtKB:  Q53H47
NIH Common Fund Data Resources
PHAROS  Q53H47
Protein Feature View
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  • Reference Sequence
  • Find similar proteins by:  Sequence   |   Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
LYFA PeptideC4N/AMutation(s): 0 
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MG
Query on MG

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A, B
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A,BL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.205 
  • R-Value Observed: 0.208 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 158.826α = 90
b = 46.521β = 92.04
c = 61.748γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction

Structure Validation

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Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-11-25
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance