3DO9 | pdb_00003do9

Crystal structure of protein ba1542 from bacillus anthracis str.ames

PDB DOI: https://doi.org/10.2210/pdb3DO9/pdb

Classification: structural genomics, unknown function
Organism(s): Bacillus anthracis
Mutation(s): No

Deposited: 2008-07-03 Released: 2008-09-02
Deposition Author(s): Patskovsky, Y., Ozyurt, S., Freeman, J., Iizuka, M., Maletic, M., Smith, D., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.75 Å
R-Value Free:
0.312 (Depositor), 0.327 (DCC)
R-Value Work:
0.264 (Depositor), 0.292 (DCC)
R-Value Observed:
0.265 (Depositor)

wwPDB Validation 3D Report Full Report

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This is version 1.4 of the entry. See complete history.

Literature

Crystal Structure of Protein Ba1542 from Bacillus Anthracis Str.Ames.

Patskovsky, Y., Ozyurt, S., Freeman, J., Iizuka, M., Maletic, M., Smith, D., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C.

To be published.

Macromolecule Content

Total Structure Weight: 68.04 kDa
Atom Count: 4,463
Modeled Residue Count: 520
Deposited Residue Count: 564
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
UPF0302 protein BA_1542/GBAA1542/BAS1430	A, B, C	188	Bacillus anthracis	Mutation(s): 0 Gene Names: BA_1542, GBAA1542, BAS1430
UniProt
Find proteins for Q81SV3 (Bacillus anthracis) Explore Q81SV3 Go to UniProtKB: Q81SV3
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q81SV3
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.75 Å
R-Value Free: 0.312 (Depositor), 0.327 (DCC)
R-Value Work: 0.264 (Depositor), 0.292 (DCC)
R-Value Observed: 0.265 (Depositor)

Space Group: P 6₅ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 127.742	α = 90
b = 127.742	β = 90
c = 196.068	γ = 120

Software Package:

Software Name	Purpose
SHELXD	phasing
REFMAC	refinement
HKL-2000	data reduction
HKL-2000	data scaling

Structure Validation

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Entry History

Deposition Data

Released Date: 2008-09-02

Deposition Author(s):

New York SGX Research Center for Structural Genomics (NYSGXRC)

Revision History (Full details and data files)

Version 1.0: 2008-09-02
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2018-11-14
Changes: Data collection, Structure summary
Version 1.3: 2021-02-10
Changes: Database references, Structure summary
Version 1.4: 2024-02-21
Changes: Data collection, Database references, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.