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Crystal structure of protein ba1542 from bacillus anthracis str.ames
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 294 100MM BIS-TRIS,PH 6.5, 3500MM SODIUM CHLORIDE, 10% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K, pH 6.50
Crystal Properties Matthews coefficient Solvent content 3.51 65
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 127.742 α = 90 b = 127.742 β = 90 c = 196.068 γ = 120
Symmetry Space Group P 65 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 77 CCD MAR CCD 165 mm 2007-03-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 31-ID APS 31-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 50 99.7 0.122 4.1 7.7 26606 -0.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.7 2.8 99.8 0.501 1.1 5.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.75 20 24341 797 99.9 0.26532 0.26378 0.2921 0.31204 0.3274 RANDOM 86.025
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.81 0.9 1.81 -2.71
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 44.452 r_dihedral_angle_3_deg 27.068 r_scangle_it 20.978 r_dihedral_angle_1_deg 15.033 r_scbond_it 14.739 r_dihedral_angle_4_deg 14.137 r_mcangle_it 10.863 r_mcbond_it 6.766 r_angle_refined_deg 0.895 r_chiral_restr 0.523
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 44.452 r_dihedral_angle_3_deg 27.068 r_scangle_it 20.978 r_dihedral_angle_1_deg 15.033 r_scbond_it 14.739 r_dihedral_angle_4_deg 14.137 r_mcangle_it 10.863 r_mcbond_it 6.766 r_angle_refined_deg 0.895 r_chiral_restr 0.523 r_symmetry_hbond_refined 0.359 r_symmetry_vdw_refined 0.342 r_nbtor_refined 0.339 r_nbd_refined 0.283 r_xyhbond_nbd_refined 0.249 r_gen_planes_refined 0.017 r_bond_refined_d 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4454 Nucleic Acid Atoms Solvent Atoms 9 Heterogen Atoms
Software Software Software Name Purpose SHELXD phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling