3C29

Cre-loxP Synaptic structure


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.228 
  • R-Value Work: 0.192 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Synapsis study in detail

Ghosh, K.Van Duyne, G.D.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Recombinase cre
A, B, G, H
322Escherichia phage P1Mutation(s): 0 
Gene Names: cre
Find proteins for P06956 (Escherichia phage P1)
Go to UniProtKB:  P06956
Entity ID: 2
MoleculeChainsLengthOrganism
LoxP DNA, chain C,C35N/A
Entity ID: 3
MoleculeChainsLengthOrganism
LoxP DNA, chain D,FD,F34N/A
Entity ID: 4
MoleculeChainsLengthOrganism
LoxP DNA, chain EE34N/A
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
1AP
Query on 1AP
C, E
DNA LINKINGC10 H15 N6 O6 PDA
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.228 
  • R-Value Work: 0.192 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 136.413α = 90.00
b = 136.413β = 90.00
c = 218.826γ = 120.00
Software Package:
Software NamePurpose
HKL-2000data reduction
SCALEPACKdata scaling
HKL-2000data scaling
DENZOdata reduction
REFMACrefinement
ADSCdata collection
PDB_EXTRACTdata extraction
AMoREphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-02-17
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-10-25
    Type: Refinement description